Fsync-ing the write ahead log in sync threading

Overview The default method by which SQLite implements atomic commit and rollback is a rollback journal. Beginning with version 3. There are advantages and disadvantages to using WAL instead of a rollback journal.

Fsync-ing the write ahead log in sync threading

In many applications it's nice to know that kernel buffers are flushed to disk even if this alone does not necessarily guarantees data is actually written to the disk, as the disk itself can have caching layersbut unfortunately fsync tends to be monkey assess slow.

As I like numbers, slow is, for instance, 55 milliseconds against a small file with not so much writes, while the disk is idle. Slow means a few seconds when the disk is busy and there is some serious amount of data to flush. With some application this is not a problem.

For instance when you save your edited file in vim the worst that can happen is some delay before the editor will quit. But there are applications where both speed and persistence guarantees are required, especially when we talk about databases.

Like in my specific case: Redis supports a persistence mode called Append Only File, where every change to the dataset is written on disk before reporting a success status code to the client performing the operation.

In this kind of application it is desirable to fsync in order to make sure the data is actually written on disk, in the event of a system crash or alike. Since fsyncing is slow, Redis allows the user to select among three different fsync policies: In Linux this usually means that data will be flushed on disk at max in 30 seconds.

But you can change the kernel settings to change this defaults if needed.

Conclusions

The first option is the faster, the second is almost as fast as the first but much safer, the third is so slow to be basically impossible to use, at the point I'm thinking about dropping it. The "fsync everysec" policy is a very good compromise and works well in practice if the disk is not too much busy serving other processes, but since in this mode we just need to sync every second without our sync being blocking from the point of view of reporting the successful status code to the client, an obvious thing to do is moving the fsync call into another thread.

Doing things in this way, in theory, when from time to time an fsync will take too much as the disk is busy, no one will notice and the latency from the point of view of the client talking with the Redis server will be good as usually. But I started to have the feeling that this would be totally useless, as the write 2 call would block anyway if there was a slow fsync going on against the same file, so I wrote the following test program: The program is pretty simple.

It starts one thread doing an fsync call every second, while the other main thread does a write 10 times per second. Both syscalls are benchmarked in order to check if when a slow fsync is in progress the write will also block for the same time. The output speaks for itself: Write in 11 microseconds Write in 12 microseconds Write in 12 microseconds Write in 12 microseconds Sync in microseconds 0 Write in microseconds Write in 11 microseconds Write in 11 microseconds Write in 11 microseconds Write in 11 microseconds Unfortunately my suspicious is confirmed.

This is really counter intuitive since after all we are talking about flushing buffers on disk.

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When this operation is started the kernel could allocate new buffers that will be used by new write 2 calls, so my guess is, this is a Linux limitation, not something that must be this way. Since this behavior seemed so strange I started wondering if fsync actually blocks all the other writes until the buffers are not flushed on disk because it is required to also flush metadata.

So I tried the same thing with fdatasyncthat is much faster, unfortunately it just takes some more time to see the same behavior because fdatasync calls are usually much faster, but from time to time I was able to see this happening again: Write in 13 microseconds Write in 13 microseconds Write in 14 microseconds Write in 14 microseconds Write in 12 microseconds Write in 13 microseconds Write in 12 microseconds Sync in microseconds 0 Write in microseconds Write in 13 microseconds Write in 10 microseconds Write in 13 microseconds Conclusions If you have a Linux write intensive application and are thinking about calling fsync in another thread in order to avoid blocking, don't do it, it's completely useless with the current kernel implementation.

If you are a kernel hacker and know why Linux is behaving in an apparently lame way about this, please make me know. Write in microseconds Write in microseconds Write in microseconds Write in microseconds Write in microseconds Write in microseconds Write in microseconds Write in microseconds Write in microseconds Write in microseconds Every write takes more than 20 times more time, but it's much faster blocking us every 10 writes compared to the big stop-the-world-forus every 10 writes with fsync.

So we have a clear winner here for "fsync always". Still no better solution of the current one for "fsync everysec" but this is working pretty well already. Subscribe to the RSS feed of this blog or use the newsletter service in order to receive a notification every time there is something of new to read here.The write-ahead log is the durability feature that allows WiredTiger to survive a process or system crash.

(MongoDB calls this the "journal".)Any thread writing data to WiredTiger first appends a record describing the write operation to the write-ahead log; in the event of a crash, any writes that were not persisted to the storage tables can be replayed from this log.

See the ZooKeeper troubleshooting guide , [myid:] - WARN [[email protected]] - fsync-ing the write ahead log in SyncThread:0 took ms which will adversely effect operation latency. [SyncThread:0] WARN urbanagricultureinitiative.comnLog - fsync-ing the write ahead log in SyncThread:0 took ms which will adversely effect operation latency.

See the ZooKeeper troubleshooting guide. Database speed tests (mysql and postgresql) - part 1 Write-ahead log entries are pretty small, so there's probably no reason that each drive revolution can't write out all the queued-up WAL.

Database speed tests (mysql and postgresql) - part Strategies to address scalability;. The symptoms are: (1) All nodes show messages like "fsync-ing the write ahead log in SyncThread:0 took ms which will adversely effect operation latency.

See the ZooKeeper troubleshooting guide" with times typically around 5 seconds.

fsync-ing the write ahead log in sync threading

Spring-XD: Jobs automatic undeployment on zookeeper time-out in xd-singlenode mode. Ask Question. still seeing below entry in log - urbanagricultureinitiative.comper fsync-ing the write ahead log in SyncThread:0 took ms which will adversely effect operation latency. See the ZooKeeper troubleshooting guide.

Spring-XD: Jobs automatic undeployment on zookeeper time-out in xd-singlenode mode - Stack Overflow